STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005011974NudC domain containing 3. (360 aa)    
Predicted Functional Partners:
DYNLL2
Dynein light chain 2, cytoplasmic.
     
 0.867
wdr60
WD repeat domain 60.
    
 0.862
wdr34
WD repeat domain 34.
    
 0.860
dynlt1
Dynein light chain Tctex-type 1.
     
 0.854
dync2li1
Dynein cytoplasmic 2 light intermediate chain 1.
     
 0.853
tctex1d2
Tctex1 domain containing 2.
     
 0.847
ENSMMDP00005006218
Dynein, cytoplasmic 1, light intermediate chain 2.
   
 0.798
ENSMMDP00005011573
Dynein, cytoplasmic 1, light intermediate chain 1.
   
 0.798
PAFAH1B1
Lissencephaly-1 homolog A.
   
 0.784
LOC115370974
Lissencephaly-1 homolog B.
   
 0.784
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.