STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nup88Nucleoporin 88. (714 aa)    
Predicted Functional Partners:
ENSMMDP00005033167
Nucleoporin 214.
    
 0.996
nup85
Nucleoporin 85.
   
 0.991
nup98
Nucleoporin 98.
    
 0.990
nup62
Nucleoporin 62.
    
 0.989
nup43
Nucleoporin 43.
   
 0.989
ENSMMDP00005015191
Nucleoporin 107.
   
 0.988
ENSMMDP00005019902
Nucleoporin 93.
    
 0.987
ENSMMDP00005025491
Nucleoporin 155.
    
 0.987
seh1l
SEH1 like nucleoporin.
   
 0.986
ENSMMDP00005005862
Nucleoporin 35.
    
 0.984
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.