STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005013215Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b. (650 aa)    
Predicted Functional Partners:
PTK7
Protein tyrosine kinase 7 (inactive).
    
 0.907
LOC115374146
Uncharacterized LOC115374146.
    
  0.887
ENSMMDP00005050894
Vav 3 guanine nucleotide exchange factor b.
    
 0.870
ENSMMDP00005055867
Netrin g1a.
    
 0.870
ripk4
Receptor interacting serine/threonine kinase 4.
   
 0.865
ENSMMDP00005047348
annotation not available
   
 0.865
LOC115372922
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2.
  
0.844
LRIT2
Leucine rich repeat, Ig-like and transmembrane domains 2.
  
0.841
ENSMMDP00005014665
annotation not available
    
  0.829
ENSMMDP00005015537
Adhesion G protein-coupled receptor L1a.
    
  0.817
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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