STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GHITMGrowth hormone inducible transmembrane protein. (350 aa)    
Predicted Functional Partners:
ENSMMDP00005045361
BSD domain containing 1.
   
    0.775
LOC115364262
Cytochrome b-c1 complex subunit 2, mitochondrial-like.
   
   0.758
LOC115377663
Cytochrome b-c1 complex subunit 2, mitochondrial-like.
   
   0.758
ENSMMDP00005028185
Testis enhanced gene transcript (BAX inhibitor 1).
   
  
0.690
sdha
Succinate dehydrogenase complex flavoprotein subunit A.
   
    0.565
vamp7
Vesicle associated membrane protein 7.
      
 0.565
ENSMMDP00005022968
annotation not available
      
 0.537
clrn3
Clarin 3.
      
 0.537
vti1a
Vesicle transport through interaction with t-SNAREs 1A.
      
 0.457
ENSMMDP00005024275
Transmembrane BAX inhibitor motif containing 4.
   
  
 0.455
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.