STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLEC12Collectin subfamily member 12. (778 aa)    
Predicted Functional Partners:
colec11
Collectin subfamily member 11.
  
 
 
0.831
ENSMMDP00005038221
annotation not available
    
  0.810
ENSMMDP00005005021
annotation not available
    
 
0.742
ENSMMDP00005005350
annotation not available
    
 
0.742
ENSMMDP00005015206
Mannose receptor, C type 1a.
    
 
0.742
mysm1
Myb like, SWIRM and MPN domains 1.
    
 0.695
LOC115374146
Uncharacterized LOC115374146.
   
  0.664
ENSMMDP00005044090
Translocase of outer mitochondrial membrane 20.
    
 0.664
ENSMMDP00005044094
annotation not available
    
 0.664
slf1
SMC5-SMC6 complex localization factor 1.
   
 0.621
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.