STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lratd1LRAT domain containing 1. (262 aa)    
Predicted Functional Partners:
LOC115373086
Dapper homolog 2-like.
   
    0.775
kiaa0355
KIAA0355 ortholog.
      
 0.529
ENSMMDP00005054520
Phospholipase A and acyltransferase 1.
      
 0.469
rsad1
Radical S-adenosyl methionine domain containing 1.
      
 0.452
sf3b3
Splicing factor 3b subunit 3.
      
 0.412
rnf113a
Ring finger protein 113A.
      
 0.402
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.