STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sar1aSecretion associated Ras related GTPase 1A. (198 aa)    
Predicted Functional Partners:
preb
Prolactin regulatory element binding.
   
 0.982
ENSMMDP00005005324
SEC31 homolog A, COPII coat complex component.
   
 0.965
LOC115377640
Protein transport protein Sec31A-like.
   
 0.965
ENSMMDP00005016167
Sec23 homolog A, coat complex II component.
    
 0.951
LOC115361055
Protein transport protein Sec23A.
    
 0.951
sec13
SEC13 homolog, nuclear pore and COPII coat complex component.
   
 0.932
LOC115366401
Protein transport protein Sec24B-like.
   
 0.921
sec24a
SEC24 homolog A, COPII coat complex component.
   
 0.921
ENSMMDP00005005330
annotation not available
   
 0.876
ankrd40
Ankyrin repeat domain 40.
   
 0.876
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.