STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbx20T-box transcription factor 20. (437 aa)    
Predicted Functional Partners:
gsc
Goosecoid homeobox.
    
 
 0.863
ENSMMDP00005051146
annotation not available
    
 
 0.863
phf13
PHD finger protein 13.
    
   0.762
slc25a21
Solute carrier family 25 member 21.
    
   0.754
nkx2-5
NK2 homeobox 5.
   
 
 0.728
gata4
GATA binding protein 4.
   
 
 0.654
ENSMMDP00005019076
TLE family member 3, transcriptional corepressor a.
    
 
 0.622
ENSMMDP00005025602
TLE family member 2, transcriptional corepressor a.
    
 
 0.622
ENSMMDP00005025611
TLE family member 2, transcriptional corepressor b.
    
 
 0.622
ENSMMDP00005025616
annotation not available
    
 
 0.622
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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