STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rcor1REST corepressor 1. (449 aa)    
Predicted Functional Partners:
kdm1a
Lysine demethylase 1A.
   
 0.985
rest
RE1 silencing transcription factor.
    
 0.943
ENSMMDP00005021677
PHD finger protein 21Ab.
   
 0.914
KDM1B
Lysine demethylase 1B.
   
 0.894
ENSMMDP00005041344
Si:ch211-127i16.2.
    
 0.886
ENSMMDP00005053811
Monoamine oxidase.
    
 0.886
hmg20b
High mobility group 20B.
   
 0.885
ENSMMDP00005020053
Histone deacetylase 1.
    
 0.884
HDAC1
Probable histone deacetylase 1-B.
    
 0.884
hdac8
Histone deacetylase 8.
    
 0.834
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.