STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005016551annotation not available (323 aa)    
Predicted Functional Partners:
ENSMMDP00005006973
pre-mRNA processing factor 8.
   
 0.991
ascc2
Activating signal cointegrator 1 complex subunit 2.
    
 0.988
trip4
Thyroid hormone receptor interactor 4.
    
 0.985
sf3b3
Splicing factor 3b subunit 3.
   
 0.982
prpf6
pre-mRNA processing factor 6.
   
 0.982
sart1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
   
 0.980
snw1
SNW domain containing 1.
    
 0.980
prpf31
pre-mRNA processing factor 31.
    
 0.979
sf3b1
Splicing factor 3b subunit 1.
   
 0.979
xab2
XPA binding protein 2.
    
 0.978
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.