STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
smarcc1SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1. (1126 aa)    
Predicted Functional Partners:
brd7
Bromodomain containing 7.
   
 0.983
phf10
PHD finger protein 10.
    
 0.982
ENSMMDP00005053313
AT rich interactive domain 2 (ARID, RFX-like).
   
 0.982
ENSMMDP00005054991
Actin-like 6A.
    
 0.982
smarce1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.
    
 0.977
LOC115363472
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like.
    
 0.977
ENSMMDP00005053944
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2.
    
 0.970
ENSMMDP00005008746
Polybromo 1.
   
 0.967
LOC115359791
Protein polybromo-1-like.
   
0.967
smarcd3
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3.
    
 0.967
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.