STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005016958Bromodomain and WD repeat domain containing 3. (1739 aa)    
Predicted Functional Partners:
mysm1
Myb like, SWIRM and MPN domains 1.
   
 0.851
mad2l1
Mitotic arrest deficient 2 like 1.
   
 0.811
cdc16
Cell division cycle 16.
   
 0.794
anapc4
Anaphase promoting complex subunit 4.
    
 0.786
cpsf1
Cleavage and polyadenylation specific factor 1.
    
 0.785
anapc1
Anaphase promoting complex subunit 1.
    
 0.779
ENSMMDP00005053990
TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
0.776
ENSMMDP00005020225
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.769
LOC115371254
Transcription initiation factor TFIID subunit 9-like.
    
 0.767
mad1l1
Mitotic arrest deficient 1 like 1.
    
 0.766
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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