STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115368190Transcription factor E2F3-like. (439 aa)    
Predicted Functional Partners:
tfdp1
Transcription factor Dp-1.
   
 0.983
rb1
RB transcriptional corepressor 1.
   
 0.979
ENSMMDP00005012372
Retinoblastoma-like 1 (p107).
   
 0.966
ENSMMDP00005041849
Retinoblastoma-like 2 (p130).
   
 0.966
ccna1
Cyclin A1.
   
 0.918
ccna2
Cyclin A2.
   
 0.918
ENSMMDP00005021984
E2F transcription factor 1.
  
 
0.916
lin9
Lin-9 DREAM MuvB core complex component.
    
 0.848
ENSMMDP00005034807
Si:ch211-160f23.5.
  
  
 
0.844
ENSMMDP00005017571
annotation not available
    
 0.834
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.