STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115371298Serine/arginine-rich splicing factor 1B. (243 aa)    
Predicted Functional Partners:
eif4a3
Eukaryotic translation initiation factor 4A3.
  
 0.988
rbm8a
RNA binding motif protein 8A.
   
 0.986
LOC115357484
Protein mago nashi homolog.
   
 0.981
srsf10
Serine and arginine rich splicing factor 10.
   
 0.980
SRSF10
Serine/arginine-rich splicing factor 10-like.
   
 0.980
srsf7
Serine and arginine rich splicing factor 7.
   
0.974
LOC115370701
Serine/arginine-rich splicing factor 7-like.
   
0.974
SRSF3
Serine and arginine rich splicing factor 3.
   
0.962
LOC115359296
Serine/arginine-rich splicing factor 3-like.
   
0.962
LOC115369042
Serine/arginine-rich splicing factor 9-like.
  
0.954
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.