STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALYREF-2THO complex subunit 4-like. (247 aa)    
Predicted Functional Partners:
thoc2
THO complex 2.
   
 0.991
ENSMMDP00005043985
Zgc:153681.
    
 0.990
eif4a3
Eukaryotic translation initiation factor 4A3.
   
 0.988
LOC115367476
Spliceosome RNA helicase DDX39B.
   
 0.987
DDX39A
ATP-dependent RNA helicase DDX39A.
   
 0.985
LOC115367205
ATP-dependent RNA helicase DDX39A-like.
   
 0.985
LOC115357484
Protein mago nashi homolog.
   
 0.974
thoc5
THO complex 5.
   
 0.972
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.970
thoc1
THO complex 1.
    
 0.970
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.