STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005017957Amphiphysin. (758 aa)    
Predicted Functional Partners:
ENSMMDP00005020187
Rho guanine nucleotide exchange factor (GEF) 38.
    
 
 0.776
dnmbp
Dynamin binding protein.
    
 
 0.776
LOC115363616
Growth arrest-specific protein 7-like.
    
 0.740
ENSMMDP00005050785
annotation not available
    
 0.740
mxd1
MAX dimerization protein 1.
    
  0.730
pex3
Peroxisomal biogenesis factor 3.
   
 0.717
ENSMMDP00005030633
annotation not available
   
 0.707
ENSMMDP00005034900
Dynamin 1a.
   
 0.707
ddx20
DEAD-box helicase 20.
    
  0.696
LOC115370720
Clathrin heavy chain 1-like.
    
 
 0.693
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.