STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005018774RIPOR family member 3. (864 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
  0.963
ENSMMDP00005015100
Fras1 related extracellular matrix 1b.
    
 0.746
ENSMMDP00005027227
Fras1 related extracellular matrix 1a.
    
 0.746
gle1
GLE1 RNA export mediator.
    
 0.691
rps28
Ribosomal protein S28.
   
  0.686
ENSMMDP00005030322
Ribosomal protein S15.
   
  0.686
rps11
Ribosomal protein S11.
   
 0.678
rps15a
Ribosomal protein S15a.
   
 0.670
arl6ip1
ADP ribosylation factor like GTPase 6 interacting protein 1.
   
 0.670
ENSMMDP00005023977
Ribosomal protein S21.
   
  0.657
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.