STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005020941Calcium channel, voltage-dependent, gamma subunit 4b. (198 aa)    
Predicted Functional Partners:
cacnb1
Calcium voltage-gated channel auxiliary subunit beta 1.
     
 0.925
LOC115362908
Voltage-dependent calcium channel gamma-2 subunit-like.
  
  
 
0.924
CACNG2
Calcium voltage-gated channel auxiliary subunit gamma 2.
  
 
 
0.913
LOC115369722
Glutamate receptor 2-like.
   
 0.879
gria2
Glutamate ionotropic receptor AMPA type subunit 2.
   
 0.879
ENSMMDP00005004140
annotation not available
     
 0.877
ENSMMDP00005028618
annotation not available
     
 0.877
ENSMMDP00005007006
Calcium channel, voltage-dependent, R type, alpha 1E subunit a.
   
 
 0.872
ENSMMDP00005035260
annotation not available
   
 
 0.872
ENSMMDP00005020936
Calcium channel, voltage-dependent, gamma subunit 1b.
     
 0.871
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.