STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115377910Transcription factor Sox-9-like. (522 aa)    
Predicted Functional Partners:
ENSMMDP00005036332
RUNX family transcription factor 2b.
   
 0.724
ENSMMDP00005010554
Early growth response 2b.
    
 0.710
ctnnb1
Catenin beta 1.
    
 0.710
ENSMMDP00005026081
RUNX family transcription factor 1.
   
 0.698
ENSMMDP00005045423
RUNX family transcription factor 3.
   
 0.698
LOC115365946
Doublesex- and mab-3-related transcription factor 1-like.
    
 0.655
LOC115372865
Runt-related transcription factor 1-like.
   
 0.651
LOC115369411
POU domain, class 5, transcription factor 1-like.
    
 0.637
LOC115365059
Nuclear receptor subfamily 5 group A member 2-like.
    
 0.625
nr5a2
Nuclear receptor subfamily 5 group A member 2.
    
 0.623
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.