STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clcn5Chloride voltage-gated channel 5. (843 aa)    
Predicted Functional Partners:
ostm1
Osteoclastogenesis associated transmembrane protein 1.
    
 0.778
lats2
Large tumor suppressor kinase 2.
    
 0.661
lats1
Large tumor suppressor kinase 1.
    
 0.661
ENSMMDP00005034999
annotation not available
     
 0.623
PTPN14
Protein tyrosine phosphatase non-receptor type 14.
    
 
 0.592
LOC115371547
Merlin-like.
     
 0.563
nf2
Neurofibromin 2.
     
 0.563
frmd1
FERM domain containing 1.
     
 0.544
ENSMMDP00005048791
FERM domain containing 6.
     
 0.544
ptpn21
Protein tyrosine phosphatase non-receptor type 21.
    
 
 0.524
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.