STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115365196Dynein light chain 2, cytoplasmic. (90 aa)    
Predicted Functional Partners:
wdr60
WD repeat domain 60.
    
 0.979
wdr34
WD repeat domain 34.
    
 0.964
DYNC1I1
Dynein cytoplasmic 1 intermediate chain 1.
    
 0.958
LOC115380404
Cytoplasmic dynein 1 intermediate chain 2.
    
 0.958
LOC115374763
Cytoplasmic dynein 1 intermediate chain 2-like.
    
 0.958
dync2li1
Dynein cytoplasmic 2 light intermediate chain 1.
    
 0.955
dynlrb1
Dynein light chain roadblock-type 1.
   
 0.952
ENSMMDP00005013792
annotation not available
   
 0.952
tctex1d1
Tctex1 domain containing 1.
    
 0.933
tctex1d2
Tctex1 domain containing 2.
    
 0.932
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.