STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zgpatZinc finger CCCH-type and G-patch domain containing. (533 aa)    
Predicted Functional Partners:
prpf3
pre-mRNA processing factor 3.
   
   0.818
e4f1
E4F transcription factor 1.
   
   0.770
prpf4
pre-mRNA processing factor 4.
    
   0.698
dnajc10
DnaJ heat shock protein family (Hsp40) member C10.
   
  
 0.554
MARCHF6
Membrane associated ring-CH-type finger 6.
   
  
 0.545
ENSMMDP00005007128
Membrane-associated ring finger (C3HC4) 6.
   
  
 0.545
arfrp1
ADP ribosylation factor related protein 1.
   
  
 0.533
LOC115376593
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15-like.
   
   0.511
DHX15
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
   
   0.511
ENSMMDP00005009188
annotation not available
    
   0.505
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.