STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pax8Paired box 8. (460 aa)    
Predicted Functional Partners:
gsc
Goosecoid homeobox.
    
 
 0.656
ENSMMDP00005051146
annotation not available
    
 
 0.656
ENSMMDP00005026081
RUNX family transcription factor 1.
    
 0.648
ENSMMDP00005036332
RUNX family transcription factor 2b.
    
 0.646
ENSMMDP00005045423
RUNX family transcription factor 3.
    
 0.646
PPARA
Peroxisome proliferator-activated receptor alpha-like.
     
 0.633
PPARG
Peroxisome proliferator activated receptor gamma.
     
 0.633
LOC115373595
Transforming protein p54/c-ets-1-like.
   
 
 0.631
ets1
ETS proto-oncogene 1, transcription factor.
   
 
 0.631
ENSMMDP00005017630
annotation not available
   
 
 0.631
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.