STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115369029T-box transcription factor TBX5-A-like. (525 aa)    
Predicted Functional Partners:
nkx2-5
NK2 homeobox 5.
   
 
 0.902
yap1
Yes associated protein 1.
    
 0.765
wwtr1
WW domain containing transcription regulator 1.
    
 0.724
gata4
GATA binding protein 4.
   
 0.693
hand2
Heart and neural crest derivatives expressed 2.
   
 0.684
ctnnb1
Catenin beta 1.
    
 0.612
gata6
GATA binding protein 6.
   
 0.599
LOC115362271
Natriuretic peptides A-like.
     
 0.585
gata5
GATA binding protein 5.
   
 0.545
ENSMMDP00005026081
RUNX family transcription factor 1.
    
 0.520
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.