STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
det1DET1 partner of COP1 E3 ubiquitin ligase. (573 aa)    
Predicted Functional Partners:
ENSMMDP00005050064
Damage-specific DNA binding protein 1.
    
 0.997
cop1
COP1 E3 ubiquitin ligase.
  
 
 0.994
ENSMMDP00005030063
Cullin 4A.
    
 0.980
cul4b
Cullin 4B.
    
 0.980
rbx1
Ring-box 1.
    
 0.974
dda1
DET1 and DDB1 associated 1.
    
 0.957
DDA1
DET1- and DDB1-associated protein 1-like.
    
 0.957
ddb2
Damage specific DNA binding protein 2.
     
 0.955
dcaf5
DDB1 and CUL4 associated factor 5.
     
 0.949
dtl
Denticleless E3 ubiquitin protein ligase homolog.
     
 0.939
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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