STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl52Mitochondrial ribosomal protein L52. (129 aa)    
Predicted Functional Partners:
mrps16
Mitochondrial ribosomal protein S16.
   
   0.977
mrpl55
Mitochondrial ribosomal protein L55.
   
 
 0.977
mrpl20
Mitochondrial ribosomal protein L20.
   
 
 0.968
mrpl14
Mitochondrial ribosomal protein L14.
   
   0.961
ENSMMDP00005017981
Mitochondrial ribosomal protein S30.
    
 
 0.960
mrpl24
Mitochondrial ribosomal protein L24.
   
 
 0.959
mrpl30
Mitochondrial ribosomal protein L30.
   
 
 0.955
mrpl42
Mitochondrial ribosomal protein L42.
   
 
 0.953
mrpl13
Mitochondrial ribosomal protein L13.
   
 
 0.952
mrpl16
Mitochondrial ribosomal protein L16.
   
 0.951
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.