STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRD3Bromodomain containing 3. (695 aa)    
Predicted Functional Partners:
ENSMMDP00005000312
DNA methyltransferase 1 associated protein 1.
    
 0.830
taf7l
TATA-box binding protein associated factor 7 like.
    
 0.811
ruvbl2
RuvB like AAA ATPase 2.
 
  
 0.774
ENSMMDP00005046555
RuvB-like AAA ATPase 1.
 
  
 0.771
yeats4
YEATS domain containing 4.
    
 0.756
cfdp1
Craniofacial development protein 1.
    
 0.735
ENSMMDP00005009179
Snf2-related CREBBP activator protein.
   
 0.728
ENSMMDP00005046693
E1A binding protein p400.
   
 0.728
eloc
Elongin C.
    
  0.726
ENSMMDP00005054991
Actin-like 6A.
    
 0.706
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.