STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005027282annotation not available (210 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
    
  0.513
zfand4
Zinc finger AN1-type containing 4.
    
  0.456
LOC115364013
SUMO-conjugating enzyme UBC9-like.
    
  0.438
ube2i
Ubiquitin conjugating enzyme E2 I.
    
  0.438
ENSMMDP00005048110
Potassium channel tetramerization domain containing 2.
 
  
  0.438
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
    
  0.431
ENSMMDP00005010444
annotation not available
    
  0.430
ENSMMDP00005026215
annotation not available
    
  0.430
ENSMMDP00005026220
annotation not available
    
  0.430
ENSMMDP00005038699
ISG15 ubiquitin like modifier.
    
  0.430
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.