STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zbtb40Zinc finger and BTB domain containing 40. (863 aa)    
Predicted Functional Partners:
ENSMMDP00005033508
annotation not available
    
  0.872
LOC115374146
Uncharacterized LOC115374146.
    
  0.681
ENSMMDP00005033512
annotation not available
    
  0.601
bard1
BRCA1 associated RING domain 1.
    
  0.601
zzz3
Zinc finger ZZ-type containing 3.
   
 
 0.601
YTHDC2
YTH domain containing 2.
   
  0.580
ENSMMDP00005025824
annotation not available
    
 0.568
ENSMMDP00005044278
annotation not available
    
  0.531
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.530
mysm1
Myb like, SWIRM and MPN domains 1.
    
  0.529
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.