STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pex5Peroxisomal biogenesis factor 5. (644 aa)    
Predicted Functional Partners:
LOC115375639
Non-specific lipid-transfer protein-like.
   
 0.999
LOC115358450
Non-specific lipid-transfer protein-like.
   
 0.999
LOC115377572
Next to BRCA1 gene 1 protein-like.
    
 0.991
eci2
enoyl-CoA delta isomerase 2.
   
 0.989
ENSMMDP00005007117
Peroxisomal biogenesis factor 14.
   
 0.987
ephx2
Epoxide hydrolase 2.
   
 0.985
pex7
Peroxisomal biogenesis factor 7.
    
 0.985
pex13
Peroxisomal biogenesis factor 13.
   
 0.980
ENSMMDP00005001644
Peroxisomal biogenesis factor 12.
   
 0.975
fam185a
Family with sequence similarity 185 member A.
   
 0.962
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.