STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005028177Potassium channel, subfamily V, member 2b. (526 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.958
ENSMMDP00005022895
Ribosomal protein L23a.
  
 0.843
rpl30
Ribosomal protein L30.
  
 0.841
ENSMMDP00005032946
Ribosomal protein L34.
  
 0.840
rpl29
Ribosomal protein L29.
   
 0.836
rpl35
Ribosomal protein L35.
  
 0.835
ENSMMDP00005031244
Ribosomal protein L24.
  
 0.835
ENSMMDP00005046080
Ribosomal protein L32.
  
 0.833
ENSMMDP00005045064
Ribosomal protein L35a.
   
 0.831
rpl21
Ribosomal protein L21.
  
 0.830
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.