STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115366895LIM domain-binding protein 2. (386 aa)    
Predicted Functional Partners:
lmo2
LIM domain only 2.
    
 0.948
lmo3
LIM domain only 3.
    
 0.915
lmo1
LIM domain only 1.
    
 0.915
LOC115374709
T-cell acute lymphocytic leukemia protein 1.
    
 0.896
ENSMMDP00005015078
annotation not available
    
 0.896
lef1
Lymphoid enhancer binding factor 1.
    
 0.813
ENSMMDP00005015714
annotation not available
    
 0.801
lhx9
LIM homeobox 9.
    
 0.801
lhx2
LIM homeobox 2.
    
 0.801
ctnnb1
Catenin beta 1.
   
  0.786
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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