STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115374732F-box-like/WD repeat-containing protein TBL1XR1. (539 aa)    
Predicted Functional Partners:
ENSMMDP00005051366
Lysine (K)-specific methyltransferase 2E.
    
 0.977
ENSMMDP00005045792
Nuclear receptor corepressor 1.
   
 0.936
ENSMMDP00005046567
Nuclear receptor corepressor 2.
   
 0.936
ctnnb1
Catenin beta 1.
  
 0.935
hdac3
Histone deacetylase 3.
   
 0.906
LOC115367653
Catenin beta-1-like.
  
 0.898
ENSMMDP00005054255
S-phase kinase-associated protein 1.
    
 0.884
sirt1
Sirtuin 1.
   
 0.875
ENSMMDP00005046582
Selenoprotein J.
   
 0.863
ENSMMDP00005055871
annotation not available
   
 0.863
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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