STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115378409Ankyrin repeat and SOCS box protein 3-like. (560 aa)    
Predicted Functional Partners:
eloc
Elongin C.
    
 0.760
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.733
ENSMMDP00005015578
annotation not available
    
 0.690
CUL5
Cullin 5.
    
 0.690
rps3
Ribosomal protein S3.
    
 0.672
ENSMMDP00005002941
Interleukin-1 receptor-associated kinase 4.
  
 0.644
LOC115366480
F-box/WD repeat-containing protein 11.
    
 0.637
ENSMMDP00005014795
annotation not available
  
 0.636
mars1
methionyl-tRNA synthetase 1.
   
 0.634
ENSMMDP00005054255
S-phase kinase-associated protein 1.
    
  0.630
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.