STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRD-2Protein tyrosine phosphatase receptor type D. (1906 aa)    
Predicted Functional Partners:
IL1RAP
Interleukin 1 receptor accessory protein.
    
 0.865
ENSMMDP00005030895
SLIT and NTRK-like family, member 2.
   
 0.804
SLITRK1
SLIT and NTRK like family member 1.
   
 0.795
ctnnb1
Catenin beta 1.
   
 0.784
LOC115367653
Catenin beta-1-like.
   
  0.753
ENSMMDP00005000331
annotation not available
    
 0.743
ENSMMDP00005005728
Neurotrophic tyrosine kinase, receptor, type 1.
    
 0.743
ENSMMDP00005006955
Neurotrophic tyrosine kinase, receptor, type 3b.
    
 0.743
ENSMMDP00005035498
Neurotrophic tyrosine kinase, receptor, type 2b.
    
0.743
ENSMMDP00005055094
Neurotrophic tyrosine kinase, receptor, type 2a.
    
 0.743
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.