STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005029422Si:ch211-106a19.1. (784 aa)    
Predicted Functional Partners:
LOC115359270
Vesicle-associated membrane protein-associated protein B-like.
    
 0.759
vapa
VAMP associated protein A.
    
 0.759
VAPB
Vesicle-associated membrane protein-associated protein B/C-like.
    
 0.748
mospd1
Motile sperm domain containing 1.
    
 0.690
LOC115376685
Motile sperm domain-containing protein 1-like.
    
 0.690
ENSMMDP00005015323
Cyclin G associated kinase.
   
 
 0.545
LOC115360079
Transitional endoplasmic reticulum ATPase-like.
   
  0.452
vcp
Valosin containing protein.
   
  0.452
SPATA5
Spermatogenesis associated 5.
   
  0.447
spata5l1
Spermatogenesis associated 5 like 1.
   
  0.447
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.