STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
agxt2Alanine--glyoxylate aminotransferase 2. (517 aa)    
Predicted Functional Partners:
GADL1
Glutamate decarboxylase like 1.
 
 0.971
gad2
Glutamate decarboxylase 2.
 
 0.962
LOC115375454
Serine--pyruvate aminotransferase-like.
  
 0.957
agxt
Alanine--glyoxylate and serine--pyruvate aminotransferase.
  
 0.957
ENSMMDP00005050547
Zgc:163121.
 
 0.946
upb1
Beta-ureidopropionase 1.
  
 
 0.940
ENSMMDP00005033011
Malate synthase-like.
  
 
 0.922
gldc
Glycine decarboxylase.
  
 
 0.921
aldh5a1
Aldehyde dehydrogenase 5 family member A1.
 
 0.919
ENSMMDP00005055256
Pipecolic acid oxidase.
  
 
 0.914
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.