STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kpna6Karyopherin subunit alpha 6. (566 aa)    
Predicted Functional Partners:
cse1l
Chromosome segregation 1 like.
   
 0.966
kpnb1
Karyopherin subunit beta 1.
   
 0.958
xpo5
Exportin 5.
   
 0.857
ran
RAN, member RAS oncogene family.
   
 0.848
ENSMMDP00005046789
Adhesion G protein-coupled receptor D1.
   
 0.848
NCBP1
Nuclear cap binding protein subunit 1.
   
 
 0.787
ncbp2
Nuclear cap binding protein subunit 2.
   
 
 0.782
snupn
Snurportin 1.
     
 0.782
ENSMMDP00005003704
Nucleoporin 153.
   
 0.779
kpna4
Karyopherin subunit alpha 4.
  
0.778
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.