LOC115371263 protein (Myripristis murdjan) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC115371263

Olfactory receptor 52N5-like. (313 aa)

Predicted Functional Partners:

LOC115374146

0.700

ENSMMDP00005007228

0.636

ENSMMDP00005012905

0.636

ENSMMDP00005047012

0.636

LOC115364025

0.630

LOC115361531

0.611

LOC115359951

0.611

LOC115371676

0.611

ENSMMDP00005054988

0.611

LOC115375538

0.601

Your Current Organism:

Myripristis murdjan

NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMMDP00005007228	ENSMMDP00005054988	ENSMMDP00005007228	ENSMMDP00005054988	annotation not available	Guanine nucleotide binding protein (G protein), beta polypeptide 4b.	0.882
ENSMMDP00005007228	LOC115359951	ENSMMDP00005007228	ENSMMDP00005006354	annotation not available	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1-like.	0.882
ENSMMDP00005007228	LOC115361531	ENSMMDP00005007228	ENSMMDP00005000590	annotation not available	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.	0.882
ENSMMDP00005007228	LOC115364025	ENSMMDP00005007228	ENSMMDP00005036447	annotation not available	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13-like.	0.935
ENSMMDP00005007228	LOC115371263	ENSMMDP00005007228	ENSMMDP00005030085	annotation not available	Olfactory receptor 52N5-like.	0.636
ENSMMDP00005007228	LOC115371676	ENSMMDP00005007228	ENSMMDP00005037069	annotation not available	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2.	0.882
ENSMMDP00005007228	LOC115374146	ENSMMDP00005007228	ENSMMDP00005020201	annotation not available	Uncharacterized LOC115374146.	0.892
ENSMMDP00005007228	LOC115375538	ENSMMDP00005007228	ENSMMDP00005022622	annotation not available	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12.	0.835
ENSMMDP00005012905	ENSMMDP00005054988	ENSMMDP00005012905	ENSMMDP00005054988	annotation not available	Guanine nucleotide binding protein (G protein), beta polypeptide 4b.	0.882
ENSMMDP00005012905	LOC115359951	ENSMMDP00005012905	ENSMMDP00005006354	annotation not available	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1-like.	0.882
ENSMMDP00005012905	LOC115361531	ENSMMDP00005012905	ENSMMDP00005000590	annotation not available	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.	0.882
ENSMMDP00005012905	LOC115364025	ENSMMDP00005012905	ENSMMDP00005036447	annotation not available	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13-like.	0.935
ENSMMDP00005012905	LOC115371263	ENSMMDP00005012905	ENSMMDP00005030085	annotation not available	Olfactory receptor 52N5-like.	0.636
ENSMMDP00005012905	LOC115371676	ENSMMDP00005012905	ENSMMDP00005037069	annotation not available	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2.	0.882
ENSMMDP00005012905	LOC115374146	ENSMMDP00005012905	ENSMMDP00005020201	annotation not available	Uncharacterized LOC115374146.	0.892
ENSMMDP00005012905	LOC115375538	ENSMMDP00005012905	ENSMMDP00005022622	annotation not available	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12.	0.835
ENSMMDP00005047012	ENSMMDP00005054988	ENSMMDP00005047012	ENSMMDP00005054988	annotation not available	Guanine nucleotide binding protein (G protein), beta polypeptide 4b.	0.882
ENSMMDP00005047012	LOC115359951	ENSMMDP00005047012	ENSMMDP00005006354	annotation not available	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1-like.	0.882
ENSMMDP00005047012	LOC115361531	ENSMMDP00005047012	ENSMMDP00005000590	annotation not available	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.	0.882
ENSMMDP00005047012	LOC115364025	ENSMMDP00005047012	ENSMMDP00005036447	annotation not available	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13-like.	0.935