STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lamp1Lysosomal associated membrane protein 1. (413 aa)    
Predicted Functional Partners:
lamp2
Lysosomal associated membrane protein 2.
  
0.991
mtor
Mechanistic target of rapamycin kinase.
    
 
 0.958
nprl2
NPR2 like, GATOR1 complex subunit.
    
 
 0.956
rptor
Regulatory associated protein of MTOR complex 1.
    
 
 0.952
sec13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 
 0.950
nprl3
NPR3 like, GATOR1 complex subunit.
    
 
 0.950
wdr24
WD repeat domain 24.
    
 
 0.948
ENSMMDP00005013996
Missing oocyte, meiosis regulator, homolog (Drosophila).
    
   0.946
wdr59
WD repeat domain 59.
    
 
 0.946
kptn
Kaptin, actin binding protein.
    
   0.946
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.