STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005030581Sortilin-related VPS10 domain containing receptor 2. (982 aa)    
Predicted Functional Partners:
ENSMMDP00005015323
Cyclin G associated kinase.
     
 0.980
ENSMMDP00005034339
Nerve growth factor receptor a (TNFR superfamily, member 16).
    
 0.797
ENSMMDP00005000327
annotation not available
    
0.743
ENSMMDP00005000477
Sortilin 1b.
    
0.743
ENSMMDP00005033931
Si:dkey-159a18.1.
    
0.732
psmb1
Proteasome 20S subunit beta 1.
    
  0.702
psma8
Proteasome 20S subunit alpha 8.
    
  0.695
vps35
VPS35 retromer complex component.
    
 
 0.666
ENSMMDP00005038308
Insulin-like growth factor 2 receptor.
    
 0.657
LOC115363002
Uncharacterized LOC115363002.
    
 
 0.627
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.