STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115380805BTB/POZ domain-containing protein 6-B. (556 aa)    
Predicted Functional Partners:
rbx1
Ring-box 1.
    
 0.700
CUL3
Cullin-3-like.
    
 0.700
LOC115370224
Cullin-3.
    
 0.700
ENSMMDP00005020902
Bardet-Biedl syndrome 9.
    
 0.648
GAN
Gigaxonin.
     
 0.646
ubxn7
UBX domain protein 7.
    
  0.643
ube2m
Ubiquitin conjugating enzyme E2 M.
    
  0.642
ube2f
Ubiquitin conjugating enzyme E2 F (putative).
    
  0.642
ENSMMDP00005026117
annotation not available
    
  0.638
LOC115375042
NEDD8-like.
    
  0.638
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.