STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115355288Transcription intermediary factor 1-alpha-like. (1068 aa)    
Predicted Functional Partners:
smarcad1
annotation not available
   
 
 0.773
anapc4
Anaphase promoting complex subunit 4.
   
  0.749
cdc27
Cell division cycle 27.
   
  0.740
anapc1
Anaphase promoting complex subunit 1.
   
   0.732
ENSMMDP00005013589
annotation not available
    
 0.731
cdc23
Cell division cycle 23.
    
   0.731
anapc7
Anaphase promoting complex subunit 7.
    
   0.731
ENSMMDP00005033818
annotation not available
    
 0.731
bub1b
BUB1 mitotic checkpoint serine/threonine kinase B.
    
   0.731
LOC115374053
Mothers against decapentaplegic homolog 4-like.
    
 0.731
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.