STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
caln1Calneuron 1. (218 aa)    
Predicted Functional Partners:
ENSMMDP00005049186
annotation not available
    
 0.812
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.812
ENSMMDP00005025590
Myosin IIIA.
   
 0.785
myo3b
Myosin IIIB.
   
 0.785
ENSMMDP00005016645
WD repeat domain 90.
   
 
 0.671
nudt12
Nudix hydrolase 12.
    
  0.629
xpc
XPC complex subunit, DNA damage recognition and repair factor.
    
 0.619
ENSMMDP00005021005
Myosin IXB.
    
 0.607
ENSMMDP00005028258
Myosin IXb.
    
 0.607
ENSMMDP00005035280
Myosin IXAb.
    
 0.607
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.