STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttll1Tubulin tyrosine ligase like 1. (424 aa)    
Predicted Functional Partners:
lrrc49
Leucine rich repeat containing 49.
    
 0.946
tpgs2
Tubulin polyglutamylase complex subunit 2.
   
 0.940
edc3
Enhancer of mRNA decapping 3.
    
 
 0.931
ENSMMDP00005005485
Nicolin 1.
   
 0.904
tbc1d19
TBC1 domain family member 19.
   
 
 0.853
nudt12
Nudix hydrolase 12.
   
  0.851
c6h11orf49
Chromosome 6 C11orf49 homolog.
    
 
 0.828
kiaa1841
KIAA1841 ortholog.
    
   0.706
ak6
Adenylate kinase 6.
   
 
  0.680
adsl
Adenylosuccinate lyase.
     
 0.672
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.