STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpiaRibose 5-phosphate isomerase A. (268 aa)    
Predicted Functional Partners:
rpe
Ribulose-5-phosphate-3-epimerase.
  
 0.963
taldo1
Transaldolase 1.
  
 0.961
ENSMMDP00005017556
RNA binding motif protein 45.
  
 
 0.937
ENSMMDP00005036521
Xylulokinase homolog (H. influenzae).
    
 0.937
LOC115358709
Transketolase-like.
   
 0.935
LOC115361586
Transketolase-like.
   
 0.934
TKT
Transketolase.
   
 0.934
pgm5
Phosphoglucomutase 5.
  
 
 0.924
LOC115375195
Phosphoglucomutase-1-like.
  
 
 0.924
sord
Sorbitol dehydrogenase.
    
 0.921
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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