STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005033902Decorin. (352 aa)    
Predicted Functional Partners:
LOC115370468
Transforming growth factor beta-1 proprotein-like.
    
 0.962
tlr4
Toll like receptor 4.
    
 0.911
LOC115366773
Transforming growth factor beta-2 proprotein-like.
    
 0.899
tgfb2
Transforming growth factor beta 2.
    
 0.899
tgfb3
Transforming growth factor beta 3.
   
 0.895
ENSMMDP00005007907
Macrophage stimulating 1 receptor a.
   
 0.890
ENSMMDP00005016241
MET proto-oncogene, receptor tyrosine kinase.
   
 0.890
ENSMMDP00005017904
Macrophage stimulating 1 receptor b.
   
 0.890
sparc
Secreted protein acidic and cysteine rich.
   
  
 0.883
ENSMMDP00005032636
Collagen, type VI, alpha 1.
   
 0.862
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.