STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005034629PARK2 co-regulated. (233 aa)    
Predicted Functional Partners:
ENSMMDP00005016645
WD repeat domain 90.
    
 
 0.997
enkur
Enkurin, TRPC channel interacting protein.
   
 
 0.960
ENSMMDP00005049400
EF-hand domain (C-terminal) containing 1.
  
 
 0.953
efhc2
EF-hand domain containing 2.
  
 
 0.952
meig1
Meiosis/spermiogenesis associated 1.
    
 
 0.944
ENSMMDP00005009723
EF-hand domain family, member B.
   
   0.926
LOC115367675
Cilia- and flagella-associated protein 20.
    
 
 0.897
cfap52
Cilia and flagella associated protein 52.
   
 
 0.892
ENSMMDP00005027605
annotation not available
    
 
 0.890
ENSMMDP00005027614
annotation not available
    
 
 0.890
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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