STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115374652Serine/arginine-rich splicing factor 11-like. (450 aa)    
Predicted Functional Partners:
pnisr
PNN interacting serine and arginine rich protein.
   
 
 0.868
ENSMMDP00005045449
Serine/arginine repetitive matrix 1.
   
 0.829
LOC115362897
Serine/arginine-rich splicing factor 2-like.
   
 0.803
LOC115377615
Serine/arginine-rich splicing factor 2-like.
   
 0.803
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.792
LOC115359296
Serine/arginine-rich splicing factor 3-like.
   
 0.792
LOC115369042
Serine/arginine-rich splicing factor 9-like.
   
 0.763
srsf7
Serine and arginine rich splicing factor 7.
   
 0.751
LOC115370701
Serine/arginine-rich splicing factor 7-like.
   
 0.751
pabpn1
poly(A) binding protein nuclear 1.
   
 0.745
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.