STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115375321RING finger protein 11-like. (154 aa)    
Predicted Functional Partners:
LOC115355075
Ubiquitin-conjugating enzyme E2 N-like.
   
 0.781
ube2n
Ubiquitin conjugating enzyme E2 N.
   
 0.781
ENSMMDP00005018906
Itchy E3 ubiquitin protein ligase b.
    
 
 0.759
itch
Itchy E3 ubiquitin protein ligase.
    
 
 0.759
ENSMMDP00005028343
Tumor necrosis factor, alpha-induced protein 3.
   
 
 0.735
rps27a
Ribosomal protein S27a.
    
 0.714
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.689
LOC115375472
ubiquitin-60S ribosomal protein L40-like.
    
 0.689
tax1bp1
Tax1 binding protein 1.
   
 
 0.672
ENSMMDP00005010398
annotation not available
   
 0.629
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.